Bioinformatics Programmer,
Computational Health Sciences
M_ICHS-General
Custom People Group
Publications
Decoding subphenotypes in electronic medical records within late-onset Alzheimer's disease reveals heterogeneity and sex-specific differences.
medRxiv : the preprint server for health sciences
Author Correction: AI-guided precision parenteral nutrition for neonatal intensive care units.
Nature medicine
Exposure to autoimmune disorders is associated with increased Alzheimer's disease risk in a multi-site electronic health record analysis.
Cell reports. Medicine
Peripheral blood mononuclear cell transcriptomic trajectories reveal dynamic regulation of inflammatory actors in delirium.
medRxiv : the preprint server for health sciences
Comorbidity analysis and clustering of endometriosis patients using electronic health records.
medRxiv : the preprint server for health sciences
Pre-conception clinical risk factors differ between spontaneous and indicated preterm birth in a densely phenotyped EHR cohort.
BMC pregnancy and childbirth
Real world perspectives on endometriosis disease phenotyping through surgery, omics, health data, and artificial intelligence.
npj Women's Health
Data-driven discovery of cell-type-directed network-correcting combination therapy for Alzheimer's disease.
bioRxiv : the preprint server for biology
Sex-stratified analyses of comorbidities associated with an inpatient delirium diagnosis using real world data.
Research square
Harnessing EHR data for health research.
Nature medicine
Alzheimer's disease as a women's health challenge: a call for action on integrative precision medicine approaches.
npj Women's Health
Data-driven insights can transform women's reproductive health.
npj Women's Health
Exposure to autoimmune disorders increases Alzheimer's disease risk in a multi-site electronic health record analysis.
medRxiv : the preprint server for health sciences
Discovery of sparse, reliable omic biomarkers with Stabl.
Nature biotechnology
Microbiome preterm birth DREAM challenge: Crowdsourcing machine learning approaches to advance preterm birth research.
Cell reports. Medicine
Associations with spontaneous and indicated preterm birth in a densely phenotyped EHR cohort.
medRxiv : the preprint server for health sciences
MaLiAmPi enables generalizable and taxonomy-independent microbiome features from technically diverse 16S-based microbiome studies.
Cell reports methods
Sex-stratified phenotyping of comorbidities associated with an inpatient delirium diagnosis using real world data.
medRxiv : the preprint server for health sciences
Endometriosis in the era of precision medicine and impact on sexual and reproductive health across the lifespan and in diverse populations.
FASEB journal : official publication of the Federation of American Societies for Experimental Biology
Target-agnostic drug prediction integrated with medical record analysis uncovers differential associations of statins with increased survival in COVID-19 patients.
PLoS computational biology
Similarities and differences in Alzheimer's dementia comorbidities in racialized populations identified from electronic medical records.
Communications medicine
Leveraging electronic health records to identify risk factors for recurrent pregnancy loss across two medical centers: a case-control study.
Research square
Data-driven longitudinal characterization of neonatal health and morbidity.
Science translational medicine
Different HMGCR-inhibiting statins vary in their association with increased survival in patients with COVID-19.
medRxiv : the preprint server for health sciences
Large-scale placenta DNA methylation integrated analysis reveals fetal sex-specific differentially methylated CpG sites and regions.
Scientific reports
Bioinformatics Analysis of Publicly Available Single-Nuclei Transcriptomics Alzheimer's Disease Datasets Reveals APOE Genotype-Specific Changes Across Cell Types in Two Brain Regions.
Frontiers in aging neuroscience
Deep phenotyping of Alzheimer's disease leveraging electronic medical records identifies sex-specific clinical associations.
Nature communications
Nurturing diversity and inclusion in AI in Biomedicine through a virtual summer program for high school students.
PLoS computational biology
Mortality Risk Among Patients With COVID-19 Prescribed Selective Serotonin Reuptake Inhibitor Antidepressants.
JAMA network open
Sex-Stratified Single-Cell RNA-Seq Analysis Identifies Sex-Specific and Cell Type-Specific Transcriptional Responses in Alzheimer's Disease Across Two Brain Regions.
Molecular neurobiology
Sex-Specific Cross Tissue Meta-Analysis Identifies Immune Dysregulation in Women With Alzheimer's Disease.
Frontiers in aging neuroscience
Personalizing routine lab tests with machine learning.
Nature medicine
Transcriptomics-based drug repositioning pipeline identifies therapeutic candidates for COVID-19.
Scientific reports
Cross-Tissue Transcriptomic Analysis Leveraging Machine Learning Approaches Identifies New Biomarkers for Rheumatoid Arthritis.
Frontiers in immunology
Drugs in COVID-19 Clinical Trials: Predicting Transporter-Mediated Drug-Drug Interactions Using In Vitro Assays and Real-World Data.
Clinical pharmacology and therapeutics
Decreased Mortality Rate Among COVID-19 Patients Prescribed Statins: Data From Electronic Health Records in the US.
Frontiers in medicine
Medical students and the electronic health record: 'an epic use of time'.
The American journal of medicine